Burrow-Wheeler Aligner Security Vulnerabilities - February

CVE-2019-10269

BWA (aka Burrow-Wheeler Aligner) before 2019-01-23 has a stack-based buffer overflow in the bns_restore function in bntseq.c via a long sequence name in a .alt file.

CVE-2019-11371

BWA (aka Burrow-Wheeler Aligner) 0.7.17 r1198 has a Buffer Overflow via a long prefix that is mishandled in bns_fasta2bntseq and bns_dump at btnseq.c.